Data Access

Data downloads For questions around accessing Open Targets data using the data downloads. Google BigQuery/Cloud For questions around accessing Open Targets data using Google BigQuery. GraphQL API For questions around accessing Open Targets data using the GraphQL API.

Topic	Replies	Views	Activity
About the Data Access category Data Access	0	761	25 April 2021
Searching credibleSets by region overlap GraphQL API graphql	2	14	26 December 2025
Data downloads server is down! Data Access	2	13	18 December 2025
Where to get anatomical ontology term hierarchy? Data Access	5	40	4 December 2025
Issue with Downloading TSV Data from Open Targets Platform Data Access datadownloads , ot-platform	2	27	4 December 2025
Genetics data - combine variant id, target id, disease id Data downloads	1	38	19 November 2025
Best approach for L2G mapping with GWAS variant lists for a specific indication Data Access	1	62	10 November 2025
Missing 'units' in the baseline expression data? Data Access	0	19	7 November 2025
Clarification needed: disease_hpo dataset appears to contain CHEBI terms instead of HPO terms Data downloads data	2	46	31 October 2025
Querying older Open Targets Platform versions (need data from 24.09 for neurodegenerative disease) Data Access	1	44	24 October 2025
Updating API code query from OTG to OpenTargets Platform Data Access ot-platform	19	142	13 October 2025
P-values and standard errors of credible set variants Data Access genetics-portal	2	50	12 September 2025
Inconsistent Disease-target Association score from webpage Data downloads ot-platform , data	1	45	8 August 2025
Rsync.ebi.ac.uk times out Data downloads datadownloads	3	49	16 July 2025
R query for colocalizations GraphQL API batch-search , other , genetics-portal	5	113	9 July 2025
Fetching the disease ontology level GraphQL API datadownloads	3	81	1 July 2025
Credible set variants with PIP but no L2G score GraphQL API data	1	60	6 June 2025
Mapping Study IDs to EFO Terms Data Access	1	38	3 June 2025
Issues with GCP Big Query Google BigQuery/Cloud	6	173	6 May 2025
File formats and our preference for Parquet Data Access datadownloads , ot-platform , ftp	0	83	4 April 2025
PheWAS Download GraphQL API	8	108	3 April 2025
Mapping StudyLocusIDs Data downloads	3	73	2 April 2025
Data Loading Errors Data Access	1	36	31 March 2025
Disease related target data cannot be downloaded Data Access data	2	69	31 March 2025
Deprecated term: Dermatitis, atopic (MONDO:0011292) (25.03 release) Data Access data-updates , data , ot-platform	1	66	26 March 2025
Getting proteins associated to a disease GraphQL API	2	92	20 March 2025
V2G deprecation in Upcoming Release (25.03) Data Access	1	186	20 March 2025
Download pharmacogenetics for a set of UniprotIDs Data Access druggability , genetics	2	35	12 March 2025
Publication years for Proteins GraphQL API	2	53	3 March 2025
Where to find summary statistics for QTL studies (and through API)? Data Access genetics-portal	7	517	28 February 2025