L2G Scoring Pipeline Implementation

Hi Naba,

As @Annalisa_Buniello and @hcornu mentioned, this package is still under active development. It is almost feature complete, but the generated data is being under review and quality control. As such, we are not ready to release the generated data just yet and I cannot provide timeline when that would happen. But at some point, the data will certainly be shared with the scientific community.

In the meantime, you can generate any datasets as the entire pipeline depends on publicly available datasets (GnomAD, OpenTargetsPlatform, FinnGen, eQTL Catalogue). I know some of these datasets are quite heavy and the process might be quite computationally expensive. The best approach is to use some cloud compute provider’s service.

Please keep your eyes on our comms for updates.

Best,
Daniel

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