First question on open target platform

  • For some genetic markers the posterior probability is low but LG2
    score is high, they go opposite direction, how to interpret result?
  • I notice that sometimes when I look one variant and then
    other the part of molQTL remains unchanged so sometimes I do the mistake
    thinking that they have the same molQTLs. It is for both Safari and
    Chrome browsers. Then for some markers the molQTLs referring to the
    eQTLs do not appears even if I know that they are but for other
    variants the molQTL deriving from eQTLs appears but pQTLs not. It
    has
    happened that for one of my markers I saw one time tuQTLs but when I
    returned to the page they disappeared and now I see just one pQTL.
  • I have one question referring to the Open Targets old
    version, if
    for the drug association I see the Odds Ratio 2.0 it means that the
    drug work more efficiently?
  • Of course I see still benefits coming from the old version
    of Open
    Targets, and I really don’t know what I will do without it my
    work.
    I like very much the new Open Targes but the hypothesis independent genetic data are more discovery for me.

Thank you for all your work with the platform, I started many years ago with Immunobase and saw all the transformation in these years.

1 Like

Hi Magdalena,

Thank you for showing an interest!

I’d be happy to look into this - could you provide some examples to show what you mean?