I have found several studies where the number of variants returned from “search” in the API. For instance, when I search for GCST003602 via the API, numAssocLoci is 6. But study summary page and manhattan only has 5 variants. It seems like the numbers generally differ by 1 (though not always). Here are some other examples. I’ve listed the number of hits from search or manhattan:
| Search | Manhattan | |
|---|---|---|
| GCST001725 | 110 | 109 |
| GCST000879 | 70 | 69 |
| GCST011501 | 29 | 26 |
| GCST001728 | 23 | 22 |
| GCST90018933 | 17 | 15 |
| FINNGEN_R6_K11_UC_STRICT | 12 | 11 |
| FINNGEN_R6_K11_UC_STRICT2 | 12 | 11 |
| FINNGEN_R6_K11_UC_NOCD | 12 | 11 |
| GCST003602 | 6 | 5 |
| GCST000623 | 6 | 5 |
| GCST000225 | 5 | 4 |