I’ve started to explore the GraphQL API by running queries in the GraphQL playground ( Open Targets Platform ). One of my test queries, looking for indirect disease associations for a gene, produced strange results that I couldn’t corroborate on the Platform. The query: query associatedDiseases { …

Spurious indirect association/evidence via GraphQL API?

hendrik 9 December 2022 11:26 2

I would really appreciate it if someone from the OpenTargets team could have a look at this issue. As it stands I don’t think the GraphQL API is reliable for querying indirect disease associations.

Evidence missing from JSON full data download

Topic		Replies	Views
R script for GraphQL query: query targetDiseaseEvidence GraphQL API	7	912	11 January 2024
Query disease association for target list in BigQuery Google BigQuery/Cloud	3	544	21 September 2022
Returning all associations data using the Platform API GraphQL API	3	1403	11 October 2021
Score values from Disease->Target vs. Target->Disease Frequently Asked Questions	3	532	25 June 2021
Help with using the new GraphQL API to pull targets associated with few diseases GraphQL API ot-platform	2	516	28 October 2021

Spurious indirect association/evidence via GraphQL API?

Related topics