Hello, I want to write a query in R that fetch all information regarding the “Associated studies: locus-to-gene pipeline” section (especially L2G pipeline scores) based on an “Ensemble ID” of a gene as input. Could you please help me to know how should I have such a query in the R script?

Hi Yazdan, Welcome to the OpenTargets community! The table on the gene page with the l2g scores are provided by the GraphQL API, via a single request. This request is easy to script in R to automate data retrieval (for examples, please see this or other threads on the community). The API request to…

An R script to use API for fetching "Associated studies: locus-to-gene pipeline" section for a gene

Data Access GraphQL API

irene 11 August 2023 08:46 4

This has been solved here Sample R script to query GraphQL API - #5 by irene

1 Like

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An R script to use API for fetching "Associated studies: locus-to-gene pipeline" section for a gene

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